Publications

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Elevated atmospheric CO2 has small, species-specific effects on pollen chemistry and plant growth across flowering plant species

Bernauer O, Jain A, de Bivort B, Holbrook NM, Myers S, Ziska L, Crall J (2024)
Scientific Reports
DOI:
10.1038/s41598-024-63967-z
Press and Commentary
No items found.
Other
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Spatiotemporal dynamics of locomotor decisions in Drosophila melanogaster

Lebovich L & Alisch T, Redhead E, Parker M, Loewenstein Y & Couzin I, de Bivort B (2024)
Press and Commentary
No items found.
Behavior
Neuroscience
All

Drift in individual behavioral phenotype as a strategy for unpredictable worlds

Maloney R, Ye A, Saint-Pre S-K, Alisch T, Zimmerman D, Pittoors N, de Bivort B (2024)
Press and Commentary
No items found.
Behavior
Neuroscience
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Colony size buffers interactions between neonicotinoid exposure and cold stress in bumblebees

Easton-Calabria A, Thuma J, Cronin K, Melone G, Laskowski M, Smith MA-Y, Pasadyn C, de Bivort B, Crall J (2023)
Proceedings of the Royal Society B
DOI:
10.1098/rspb.2023.0555
Press and Commentary
No items found.
Behavior
All

Neural correlates of individual odor preference in Drosophila

Churgin M & Lavrentovich D, Smith M, Gao R, Boyden E, de Bivort B (2023)
Press and Commentary
No items found.
Behavior
Neuroscience
Methods
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Development under predation risk increases serotonin-signaling, variability of turning behavior and survival in adult fruit flies Drosophila melanogaster

Krama T, Munkevics M, Krams R, Grigorjeva T, Trakimas G, Jöers P, Popovs S, Zants K, Elferts D, Rantala M, Sledevskis E, Contreras-Garduño J, de Bivort B, Krams I (2023)
Frontiers in Behavioral Neuroscience
DOI:
10.3389/fnbeh.2023.1189301
Press and Commentary
No items found.
Behavior
Neuroscience
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Signatures of transposon-mediated genome inflation, host specialization, and photoentrainment in Entomophthora muscae and allied entomophthoralean fungi

Stajich J, Lovett B, Lee E, Macias A, Hajek A, de Bivort B, Kasson M, De Fine Licht H, Elya C (2023)
Other
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Neural mechanisms of parasite-induced summiting behavior in 'zombie' Drosophila

Elya C, Lavrentovich D, Lee E, Pasadyn C, Duval J, Basak M, Saykina V, de Bivort B (2023)
Behavior
Neuroscience
Methods
All

Long-term tracking and quantification of individual behavior in bumble bee colonies

Smith MA-Y, Easton-Calabria A, Zhang T, Zmyslony S, Thuma J, Cronin K, Pasadyn C, de Bivort B, Crall J (2022)
Artificial Life and Robotics
DOI:
10.1007/s10015-022-00762-x
Press and Commentary
No items found.
Behavior
Methods
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Revisiting behavioral variability: What it reveals about neural circuit structure and function

Asahina K, de Bivort BL, Kadow ICG, Yapici N (2022)
Frontiers in Behavioral Neuroscience
DOI:
10.3389/fnbeh.2022.956388
Press and Commentary
No items found.
Behavior
Neuroscience
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Precise quantification of behavioral individuality from 80 million decisions across 183,000 flies

de Bivort B, Buchanan S, Skutt-Kakaria K, Gajda E, O'Leary C, Reimers P, Akhund-Zade J, Senft R, Maloney R, Ho S, Werkhoven Z, Smith M (2021)
Frontiers in Behavioral Neuroscience
DOI:
10.3389/fnbeh.2022.836626
Press and Commentary
No items found.
Behavior
Neuroscience
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Serotoninergic modulation of phototactic variability underpins a bet-hedging strategy in Drosophila melanogaster

Krams I, Krama T, Krams R, Trakimas G, Popovs S, Jöers P, Munkevicz M, Elferts D, Rantalam M, J Makņa, de Bivort B (2021)
Frontiers in Behavioral Neuroscience
DOI:
10.3389/fnbeh.2021.659331
Press and Commentary
No items found.
Behavior
Neuroscience
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Orb weavers: Patterns in the movement sequences of spider web construction

Simpson J, de Bivort B (2021)
Current Biology
DOI:
10.1016/j.cub.2021.09.066
Behavior
Other
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The structure of behavioral variation within a genotype

Werkhoven Z, Bravin A, Skutt-Kakaria K, Reimers P, Pallares L, Ayroles J, de Bivort B (2021)
Press and Commentary
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Behavior
Neuroscience
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Genetic basis of offspring number-body weight tradeoff in Drosophila melanogaster

Akhund-Zade J, Lall S, Gajda E, Yoon D, Ayroles J, de Bivort B (2021)
G3 Genes|Genomes|Genetics
DOI:
10.1093/g3journal/jkab129
Press and Commentary
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Wild flies hedge their thermal preference bets in response to seasonal fluctuations

Akhund-Zade J, Yoon D, Bangerter A, Polizos N, Campbell M, Soloshenko A, Zhang T, Wice E, Albright A, Narayanan A, Schmidt P, Saltz J, Ayroles J, Klein M, Bergland A, de Bivort B (2020)
Press and Commentary
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Behavior
Other
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Individual, but not population asymmetries, are modulated by social environment and genotype in Drosophila melanogaster

Versace E, Caffini M, Werkhoven Z, de Bivort B (2020)
Scientific Reports
DOI:
10.1038/s41598-020-61410-7
Press and Commentary
No items found.
Behavior
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Control of synaptic specificity by establishing a relative preference for synaptic partners

Xu C, Theisen E, Maloney R, Peng J, Santiago I, Yapp C, Werkhoven Z, Rumbaut E, Shum B, Tarnogorska D, Borycz J, Tan L, Courgeon M, Meinertzhagen I, de Bivort B, Drugowitsch J, Pecot M (2019)
Press and Commentary
No items found.
Neuroscience
All

A neural circuit basis for context-modulation of individual locomotor behavior

Skutt-Kakaria K, Reimers P, Currier T, Werkhoven Z, de Bivort B (2019)
bioRxiv
DOI:
10.1101/797126
Press and Commentary
No items found.
Behavior
Neuroscience
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MARGO (Massively Automated Real-time GUI for Object-tracking), a platform for high-throughput ethology

Werkhoven Z, Rohrsen C, Qin C, Brembs B, de Bivort B (2019)
Press and Commentary
No items found.
Behavior
Methods
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Idiosyncratic neural coding and neuromodulation of olfactory individuality in Drosophila

Honegger K & Smith M, Churgin M, Turner G, de Bivort B (2019)
Press and Commentary
No items found.
Behavior
Neuroscience
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The effect of environmental enrichment on behavioral variability depends on genotype, behavior, and type of enrichment

Akhund-Zade J, Ho S, O'Leary C, de Bivort B. (2019)
Journal of Experimental Biology
DOI:
10.1242/jeb.202234
Press and Commentary
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Behavior
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Social buffering of pesticides in bumblebees: agent-based modeling of the effects of colony size and neonicotinoid exposure on behavior within nests

Crall J, de Bivort B, Dey B, Versypt A (2019)
Frontiers in Ecology and Evolution
DOI:
10.3389/fevo.2019.00051
Press and Commentary
No items found.
Behavior
Methods
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Courtship behavior: Hearing new notes in classic songs

de Bivort B (2018)
Current Biology
DOI:
10.1016/j.cub.2018.06.066
Press and Commentary
No items found.
Behavior
Other
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MAPLE (modular automated platform for large-scale experiments), a robot for integrated organism-handling and phenotyping

Alisch T, Crall J, Kao A, Zucker D, de Bivort B (2018)
Press and Commentary
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Behavior
Methods
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Stochasticity, individuality and behavior

Honegger K, de Bivort B (2018)
Current Biology
DOI:
10.1016/j.cub.2017.11.058
Press and Commentary
No items found.
Behavior
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Ethology as a physical science

Brown A, de Bivort B (2018)
Nature Physics
DOI:
10.1038/s41567-018-0093-0
Press and Commentary
No items found.
Behavior
Neuroscience
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Systematic exploration of unsupervised methods for mapping behavior

Todd J, Kain J, de Bivort B (2017)
Physical Biology
DOI:
10.1088/1478-3975/14/1/015002
Press and Commentary
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Behavior
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Ring attractor dynamics emerge from a spiking model of the entire protocerebral bridge

Kakaria K, de Bivort B (2017)
Frontiers in Behavioral Neuroscience
DOI:
10.3389/fnbeh.2017.00008
Press and Commentary
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Neuroscience
Methods
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Recovery of locomotion after injury in Drosophila depends on proprioception

Isakov A, Buchanan S, Sullivan B, Ramachandran A, Chapman J, Lu E, Mahadevan L, de Bivort B (2016)
Journal of Experimental Biology
DOI:
10.1242/jeb.133652
Press and Commentary
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Behavior
Neuroscience
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Evidence for selective attention in the insect brain

de Bivort B, van Swinderen B (2016)
Current Opinion in Insect Science
DOI:
10.1016/j.cois.2016.02.007
Press and Commentary
No items found.
Behavior
Neuroscience
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Social context modulates idiosyncrasy of behaviour in the gregarious cockroach Blaberus discoidalis

Crall J, Souffrant A, Akandwanaho D, Hescock S, Callan S, Coronado M, Baldwin M, de Bivort B (2016)
Animal Behaviour
DOI:
10.1016/j.anbehav.2015.10.032
Press and Commentary
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Behavior
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A molecular phylogeny of the temperate Gondwanan family Pettalidae (Arachnida, Opiliones, Cyphophthalmi) and the limits of taxonomic sampling

Giribet G, Boyer S, Baker C, Fernandez R, Sharma P, de Bivort B, Daniels S, Harvey M, Griswold C (2016)
Zoological Journal of the Linnean Society
DOI:
10.1111/zoj.12419
Press and Commentary
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Variability in thermal and phototactic preferences in Drosophila may reflect an adaptive bet-hedging strategy

Kain J, Zhang S, Akhund-Zade J, Samuel A, Klein M, de Bivort B (2015)
Evolution
DOI:
10.1111/evo.12813
Press and Commentary
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Behavior
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Sensorimotor structure of Drosophila larval phototaxis

Kane E, Gershow M, Afonso B, Laderet I, Klein M, Carter A, de Bivort B, Sprecher S, Samuel A (2013)
Press and Commentary
No items found.
Behavior
Neuroscience
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On Speleosiro argasiformis a troglobitic Cyphophthalmi (Arachnida:Opiliones:Pettalidae) from Table Mountain, South Africa

Giribet G, de Bivort B, Hitchcock A, Swart P (2013)
Journal of Arachnology
DOI:
10.1636/ha12-78.1
Press and Commentary
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Leg-tracking and automated behavioural classification in Drosophila

Kain J, Stokes C, Gaudry Q, Song X, Foley J, Wilson R, de Bivort B (2013)
Nature Communications
DOI:
10.1038/ncomms2908
Behavior
Methods
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Asymmetric neurotransmitter release enables rapid odour lateralization in Drosophila

Gaudry Q, Hong E, Kain J, de Bivort B, Wilson R (2013)
Press and Commentary
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Behavior
Neuroscience
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Determinants of the Drosophila odorant receptor pattern

Song E, de Bivort B, Kunes S (2012)
Developmental Cell
DOI:
10.1016/j.devcel.2011.12.015
Press and Commentary
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Neuroscience
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A cladistic reconstruction of the ancestral mite harvestman (Arachnida, Opiliones, Cyphophthalmi): portrait of a Paleozoic detritivore

de Bivort B, Clouse R, Giribet G (2012)
Press and Commentary
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Growth and asymmetry of soil microfungi colonies from 'Evolution Canyon,' Lower Nahal Oren, Mount Carmel, Israel

Raz S, Graham J, Cohen A, de Bivort B, Grishkan I, Nevo E (2012)
Press and Commentary
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Phototactic personality in fruit flies and its suppression by serotonin and white

Kain J, Stokes C, de Bivort B (2012)
Behavior
Neuroscience
Methods
All

Evolutionary and biogeographic history of an ancient and global group of arachnids (Arachnida, Opiliones, Cyphophthalmi) with a new taxonomic arrangement

Giribet G, Sharma P, Benavides L, Boyer S, Clouse R, de Bivort B, Dimitrov D, Kawaguchi G, Murienne J, Schwendinger P (2011)
Biological Journal of the Linnean Society
DOI:
10.1111/j.1095-8312.2011.01774.x
Press and Commentary
No items found.
Other
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Phylogenetic signals in morphometric data

Clouse R, de Bivort B, Giribet G (2010)
Press and Commentary
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Methods
Other
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A morphometrics-based phylogeny of the temperate Gondwanan mite harvestmen (Opiliones, Cyphophthalmi, Pettalidae)

de Bivort B, Clouse R, Giribet G (2010)
Journal of Zoological Systematics and Evolutionary Research
DOI:
10.1111/j.1439-0469.2009.00562.x
Press and Commentary
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A systematic revision of South African Pettalidae (Arachnida : Opiliones : Cyphophthalmi) based on a combined analysis of discrete and continuous characters with the description of seven new species

de Bivort B, Giribet G (2010)
Invertebrate Systematics
DOI:
10.1071/IS10015
Press and Commentary
No items found.
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Notch signaling is required for activity-dependent synaptic plasticity at the Drosophila neuromuscular junction

de Bivort B, Guo HF, Zhong Y (2009)
Journal of Neurogenetics
DOI:
10.3109/01677060902878481
Press and Commentary
No items found.
Neuroscience
All

Attractors and democratic dynamics

Bar-Yam Y, Harmon D, de Bivort B (2009)
Press and Commentary
No items found.
Other
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A phylogenetic analysis for the South-east Asian mite harvestman family Stylocellidae (Opiliones : Cyphophthalmi) - a combined analysis using morphometric and molecular data

Clouse R, de Bivort B, Giribet G (2009)
Invertebrate Systematics
DOI:
10.1071/IS09044
Press and Commentary
No items found.
Other
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Amino acid metabolic origin as an evolutionary influence on protein sequence in yeast

de Bivort B & Perlstein E, Kunes S, Schreiber S (2009)
Journal of Molecular Evolution
DOI:
10.1007/s00239-009-9218-5
Press and Commentary
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Other
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Metabolic implications for the mechanism of mitochondrial endosymbiosis and human hereditary disorders

de Bivort B, Chen C, Perretti F, Negro G, Philip T, Bar-Yam Y (2007)
Journal of Theoretical Biology
DOI:
10.1016/j.jtbi.2007.04.017
Press and Commentary
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Other
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Empirical multiscale networks of cellular regulation

de Bivort B, Huang S, Bar-Yam Y (2007)
Public Library of Science: Computational Biology
DOI:
10.1371/journal.pcbi.0030207
Press and Commentary
No items found.
Methods
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Evolutionarily conserved optimization of amino acid biosynthesis

de Bivort B, Perlstein E, Kunes S, Schreiber S (2007)
Journal of Molecular Evolution
DOI:
10.1007/s00239-007-0013-x
Press and Commentary
No items found.
Other
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Estimating kinetic parameters from HIV primary infection data through the eyes of three different mathematical models

Ciupe S, de Bivort B, Nelson P (2006)
Mathematical Biosciences
DOI:
10.1016/j.mbs.2005.12.006
Press and Commentary
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Other
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Dynamics of cellular level function and regulation derived from murine expression array data

de Bivort B, Huang S, Bar-Yam Y (2004)
Press and Commentary
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Methods
Other
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A new genus of cyphophthalmid from the Iberian Peninsula with a phylogenetic analysis of the Sironidae (Arachnida: Opiliones: Cyphophthalmi) and a SEM database of external morphology

de Bivort B, Giribet G (2004)
Invertebrate Systematics
DOI:
10.1071/is03029
Press and Commentary
No items found.
Other
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